Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881334.1_cds_XP_016437746.1_33476
CDS Infomation

[gene=LOC107763763] [db_xref=GeneID:107763763] [protein=calcium-dependent protein kinase 17-like] [protein_id=XP_016437746.1] [location=complement(join(22314..22418,22656..22755,23497..23624,24284..24451,24779..24894,25349..25501,26796..26939,27681..28395))] [gbkey=CDS]
Sequence

ATGGGGAATTGTTGCTCTAGTGGGGAAGAAACAAATGAAATTACAAACAATGAAAATGGA
CAAACCAACAATCCCAAAAATGAAGAAAATTCATCATCTACACATAATCTTGATTCCACA
ACACCAACAAAAACAACCCCTCCACCTCCAACAACAACAACAACATCCCCTAGCCCATCA
TCAAAACCATCAAAACCATCACCAATAGGGCCAGTTTTAGGCAGACCAATGGAAGATGTT
AGAACAACATATACAATAGGAAAAGAACTTGGTAGGGGCCAATTTGGTGTAACACATTTA
TGTACACATAAACAAACAGGAGAACAATTTGCATGCAAAACAATAGCAAAAAGAAAATTA
GTGAACAAAGAAGATATTGAAGATGTTAGAAGAGAAGTACAAATAATGCATCATTTGACA
GGACAACCTAATATTGTTGAATTAAAAGGAGCTTATGAAGACAAACATTCTGTGCATTTG
GTCATGGAGTTGTGTGCTGGAGGCGAACTTTTCGATCGAATTATCGCTAAGGGACATTAT
ACTGAACGTGCAGCAGCTTCATTGCTGAGAACAATTGTGCAAATTGTTCATACTTGTCAT
TCTATGGGAGTTATTCATAGAGATCTTAAGCCTGAGAATTTTCTACTTCTTAATAAGGAT
GAGAATGCACCTCTTAAAGCTACTGATTTTGGTCTTTCAGTATTCTACAAGCAAGGAGAT
GTATTTAAAGACATTGTGGGTAGTGCATATTACATTGCACCTGAAGTCTTGAAAAGAAGA
TATGGACCAGAAGTTGATATATGGAGTATTGGAGTTATGTTATATATTCTTCTTTGTGGT
GTTCCTCCTTTCTGGGCAGAAAATGAAAATGGAATATTCAATGCAATATTGAGGGGACAT
ATTGATTTTTCAAGTGATCCATGGCCTTCAATTTCCAGTGGAGCCAAAGACCTTGTCAGG
AAGATGTTGACCATAGATCCCAAGCAGAGATTAACAGCTATGCAAGTCCTCAATCATTCA
TGGATCAAGGAGGATGGAGAAGCACCAGATACACCACTGGACAATGCTGTTTTACATAGG
CTCAAACAATTCAGAGCTATGAACAAGTTTAAGAAAGTTGCTCTTCGGGTTATTGCAGGG
TGTCTATCAGAGGAAGAAATTATGGGATTGAAGCAAATGTTCAAAAGTATGGACGCTGAT
AACAGTGGATCAATAACAATTGAGGAATTAAAGCAAGGATTAGCCAAACAAGGAACTAAA
CTATCAGATTATGAGATTAAACAGTTAATGGAAGCTGCTGATGCTGATGGAAATGGGACC
ATAGATTATGAAGAATTCATCACAGCAACAATGCACATGAACAGAATGGATAAAGAAGAA
CATCTTTACACTGCATTCCAATATTTTGATAAGGATCACAGCGGATATATATCAAGAGAA
GAGCTAGAGCAAGCTCTGCGAGAATTTGGTATGAATGACGAAAATGATTTGAGGGAAATC
ATTGATGAAGTTGACACTGATCATGATGGTCGGATAAATTACGATGAGTTTGTAGCAATG
ATGAAGAAAGGAAATCCTGAAGCAGCAACAATGAACCCAAAGAAAAGAAGGGATTCATTT
GTTGCATAA

Peptide Sequence

PEP ID

XP_016437746.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 17-like [Nicotiana tabacum]
Sequence

MGNCCSSGEETNEITNNENGQTNNPKNEENSSSTHNLDSTTPTKTTPPPPTTTTTSPSPS
SKPSKPSPIGPVLGRPMEDVRTTYTIGKELGRGQFGVTHLCTHKQTGEQFACKTIAKRKL
VNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHY
TERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGD
VFKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLCGVPPFWAENENGIFNAILRGH
IDFSSDPWPSISSGAKDLVRKMLTIDPKQRLTAMQVLNHSWIKEDGEAPDTPLDNAVLHR
LKQFRAMNKFKKVALRVIAGCLSEEEIMGLKQMFKSMDADNSGSITIEELKQGLAKQGTK
LSDYEIKQLMEAADADGNGTIDYEEFITATMHMNRMDKEEHLYTAFQYFDKDHSGYISRE
ELEQALREFGMNDENDLREIIDEVDTDHDGRINYDEFVAMMKKGNPEAATMNPKKRRDSF
VA

Transcript Sequence

Gene sequence data has not been registered.